3D structure

PDB id
9RUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GGGAUCGGG*CCCAUGAAC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9RUA|1|S2|G|1604
9RUA|1|S2|G|1605
9RUA|1|S2|G|1606
9RUA|1|S2|A|1607
9RUA|1|S2|U|1608
9RUA|1|S2|C|1609
9RUA|1|S2|G|1610
9RUA|1|S2|G|1611
9RUA|1|S2|G|1612
*
9RUA|1|S2|C|1627
9RUA|1|S2|C|1628
9RUA|1|S2|C|1629
9RUA|1|S2|A|1630
9RUA|1|S2|U|1631
9RUA|1|S2|G|1632
9RUA|1|S2|A|1633
9RUA|1|S2|A|1634
9RUA|1|S2|C|1635

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SF
Small ribosomal subunit protein uS7
Chain SP
40S ribosomal protein S15
Chain SS
Small ribosomal subunit protein uS13
Chain ST
40S ribosomal protein S19

Coloring options:

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