IL_9RUC_086

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AGUCGG*CUGU

Length

10 nucleotides

Bulged bases

9RUC|1|L5|G|3839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|L5|A|2850
9RUC|1|L5|G|2851
9RUC|1|L5|U|2852
9RUC|1|L5|C|2853
9RUC|1|L5|G|2854
9RUC|1|L5|G|2855
*
9RUC|1|L5|C|3837
9RUC|1|L5|U|3838
9RUC|1|L5|G|3839
9RUC|1|L5|U|3840

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23