IL_9RUC_114

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CG*UGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9RUC_114 not in the Motif Atlas

Homologous match to IL_9PN5_102

Geometric discrepancy: 0.069

The information below is about IL_9PN5_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46637.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

25

Unit IDs

9RUC|1|L5|C|4453
9RUC|1|L5|G|4454
*
9RUC|1|L5|U|4526
9RUC|1|L5|G|4527
9RUC|1|L5|G|4528

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3