IL_9RUC_142

3D structure

PDB id

9RUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9RUC|1|L5|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RUC|1|L5|U|5003
9RUC|1|L5|C|5004
9RUC|1|L5|G|5005
9RUC|1|L5|U|5006
9RUC|1|L5|A|5007
9RUC|1|L5|C|5008
9RUC|1|L5|G|5009
*
9RUC|1|L5|U|5039
9RUC|1|L5|U|5040
9RUC|1|L5|G|5041
9RUC|1|L5|A|5042
9RUC|1|L5|A|5043
9RUC|1|L5|A|5044

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31