IL_9S3B_025

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

9S3B|1|L5|C|501, 9S3B|1|L5|C|502, 9S3B|1|L5|C|503, 9S3B|1|L5|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|G|491
9S3B|1|L5|U|492
9S3B|1|L5|G|493
9S3B|1|L5|U|494
9S3B|1|L5|C|495
9S3B|1|L5|G|496
9S3B|1|L5|G|497
9S3B|1|L5|C|498
9S3B|1|L5|G|499
9S3B|1|L5|G|500
9S3B|1|L5|C|501
9S3B|1|L5|C|502
9S3B|1|L5|C|503
9S3B|1|L5|G|504
9S3B|1|L5|G|505
*
9S3B|1|L5|U|653
9S3B|1|L5|C|654
9S3B|1|L5|C|655
9S3B|1|L5|C|656
9S3B|1|L5|C|657
9S3B|1|L5|C|658
9S3B|1|L5|G|659
9S3B|1|L5|A|660
9S3B|1|L5|C|661
9S3B|1|L5|C|662

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18