IL_9S3B_113

3D structure

PDB id

9S3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

9S3B|1|L5|A|3785, 9S3B|1|L5|C|3791, 9S3B|1|L5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3B|1|L5|C|3781
9S3B|1|L5|C|3782
9S3B|1|L5|A|3783
9S3B|1|L5|A|3784
9S3B|1|L5|A|3785
9S3B|1|L5|U|3786
9S3B|1|L5|G|3787
9S3B|1|L5|C|3788
9S3B|1|L5|C|3789
9S3B|1|L5|U|3790
9S3B|1|L5|C|3791
9S3B|1|L5|G|3792
*
9S3B|1|L5|C|3808
9S3B|1|L5|G|3809
9S3B|1|L5|C|3810
9S3B|1|L5|G|3811

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CR

Eukaryotic peptide chain release factor subunit 1

Chain Ln

60S ribosomal protein L41

Chain S2

Small subunit ribosomal RNA; SSU rRNA