3D structure

PDB id
9S3B (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.38 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3B|1|S2|G|807
9S3B|1|S2|A|808
9S3B|1|S2|A|809
9S3B|1|S2|A|810
9S3B|1|S2|A|811
9S3B|1|S2|A|812
9S3B|1|S2|A|813
9S3B|1|S2|U|814
9S3B|1|S2|U|815
*
9S3B|1|S2|A|849
9S3B|1|S2|C|850
9S3B|1|S2|C|851
9S3B|1|S2|G|852
9S3B|1|S2|C|853
9S3B|1|S2|A|854
9S3B|1|S2|G|855
9S3B|1|S2|C|856

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

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