IL_9S3C_017

3D structure

PDB id

9S3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GAAC*GAGUUCAAGAGGGC

Length

18 nucleotides

Bulged bases

9S3C|1|L5|G|409, 9S3C|1|L5|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3C|1|L5|G|387
9S3C|1|L5|A|388
9S3C|1|L5|A|389
9S3C|1|L5|C|390
*
9S3C|1|L5|G|401
9S3C|1|L5|A|402
9S3C|1|L5|G|403
9S3C|1|L5|U|404
9S3C|1|L5|U|405
9S3C|1|L5|C|406
9S3C|1|L5|A|407
9S3C|1|L5|A|408
9S3C|1|L5|G|409
9S3C|1|L5|A|410
9S3C|1|L5|G|411
9S3C|1|L5|G|412
9S3C|1|L5|G|413
9S3C|1|L5|C|414

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CZ

nascent chain

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LP

60S ribosomal protein L17

Chain LY

60S ribosomal protein L26

Chain Ll

60S ribosomal protein L39