IL_9S3C_025

3D structure

PDB id

9S3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

9S3C|1|L5|C|501, 9S3C|1|L5|C|502, 9S3C|1|L5|C|503, 9S3C|1|L5|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3C|1|L5|G|491
9S3C|1|L5|U|492
9S3C|1|L5|G|493
9S3C|1|L5|U|494
9S3C|1|L5|C|495
9S3C|1|L5|G|496
9S3C|1|L5|G|497
9S3C|1|L5|C|498
9S3C|1|L5|G|499
9S3C|1|L5|G|500
9S3C|1|L5|C|501
9S3C|1|L5|C|502
9S3C|1|L5|C|503
9S3C|1|L5|G|504
9S3C|1|L5|G|505
*
9S3C|1|L5|U|653
9S3C|1|L5|C|654
9S3C|1|L5|C|655
9S3C|1|L5|C|656
9S3C|1|L5|C|657
9S3C|1|L5|C|658
9S3C|1|L5|G|659
9S3C|1|L5|A|660
9S3C|1|L5|C|661
9S3C|1|L5|C|662

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18