IL_9S3C_031

3D structure

PDB id

9S3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9S3C|1|L5|A|932, 9S3C|1|L5|C|934, 9S3C|1|L5|A|935, 9S3C|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S3C|1|L5|A|732
9S3C|1|L5|A|733
9S3C|1|L5|G|734
9S3C|1|L5|G|735
*
9S3C|1|L5|C|928
9S3C|1|L5|A|929
9S3C|1|L5|G|930
9S3C|1|L5|C|931
9S3C|1|L5|A|932
9S3C|1|L5|G|933
9S3C|1|L5|C|934
9S3C|1|L5|A|935
9S3C|1|L5|C|936
9S3C|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a