IL_9S3C_031
3D structure
- PDB id
- 9S3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- AAGG*CAGCAGCACU
- Length
- 14 nucleotides
- Bulged bases
- 9S3C|1|L5|A|932, 9S3C|1|L5|C|934, 9S3C|1|L5|A|935, 9S3C|1|L5|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S3C_031 not in the Motif Atlas
- Homologous match to IL_8GLP_037
- Geometric discrepancy: 0.054
- The information below is about IL_8GLP_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70469.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9S3C|1|L5|A|732
9S3C|1|L5|A|733
9S3C|1|L5|G|734
9S3C|1|L5|G|735
*
9S3C|1|L5|C|928
9S3C|1|L5|A|929
9S3C|1|L5|G|930
9S3C|1|L5|C|931
9S3C|1|L5|A|932
9S3C|1|L5|G|933
9S3C|1|L5|C|934
9S3C|1|L5|A|935
9S3C|1|L5|C|936
9S3C|1|L5|U|937
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LM
- 60S ribosomal protein L14
- Chain LS
- 60S ribosomal protein L18a
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