3D structure

PDB id
9S3C (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
CAUUU*AACCUCGGG
Length
14 nucleotides
Bulged bases
9S3C|1|S2|U|305, 9S3C|1|S2|G|307
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3C|1|S2|C|216
9S3C|1|S2|A|217
9S3C|1|S2|U|218
9S3C|1|S2|U|219
9S3C|1|S2|U|220
*
9S3C|1|S2|A|301
9S3C|1|S2|A|302
9S3C|1|S2|C|303
9S3C|1|S2|C|304
9S3C|1|S2|U|305
9S3C|1|S2|C|306
9S3C|1|S2|G|307
9S3C|1|S2|G|308
9S3C|1|S2|G|309

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SI
40S ribosomal protein S8

Coloring options:

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