IL_9S3C_230
3D structure
- PDB id
- 9S3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- ACAGGA*UU
- Length
- 8 nucleotides
- Bulged bases
- 9S3C|1|S2|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S3C_230 not in the Motif Atlas
- Geometric match to IL_9E6Q_010
- Geometric discrepancy: 0.3449
- The information below is about IL_9E6Q_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10396.4
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 9
Unit IDs
9S3C|1|S2|A|1282
9S3C|1|S2|C|1283
9S3C|1|S2|A|1284
9S3C|1|S2|G|1285
9S3C|1|S2|G|1286
9S3C|1|S2|A|1287
*
9S3C|1|S2|U|1314
9S3C|1|S2|U|1315
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SK
- 40S ribosomal protein S10
- Chain SM
- 40S ribosomal protein S12
- Chain Sf
- Ubiquitin
Coloring options: