3D structure

PDB id
9S3C (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with 58 amino acid ARF1-linker - State 2
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
ACAGGAUUG*CUCGAUU
Length
16 nucleotides
Bulged bases
9S3C|1|S2|G|1285
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S3C|1|S2|A|1282
9S3C|1|S2|C|1283
9S3C|1|S2|A|1284
9S3C|1|S2|G|1285
9S3C|1|S2|G|1286
9S3C|1|S2|A|1287
9S3C|1|S2|U|1288
9S3C|1|S2|U|1289
9S3C|1|S2|G|1290
*
9S3C|1|S2|C|1309
9S3C|1|S2|U|1310
9S3C|1|S2|C|1311
9S3C|1|S2|G|1312
9S3C|1|S2|A|1313
9S3C|1|S2|U|1314
9S3C|1|S2|U|1315

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SK
40S ribosomal protein S10
Chain SM
40S ribosomal protein S12
Chain Sd
40S ribosomal protein S29
Chain Sf
Ubiquitin

Coloring options:

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