IL_9S3D_212
3D structure
- PDB id
- 9S3D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NAC bound human RNC with 58 amino acid ARF1-linker
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GGCC*GAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S3D_212 not in the Motif Atlas
- Homologous match to IL_9PN5_184
- Geometric discrepancy: 0.0733
- The information below is about IL_9PN5_184
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9S3D|1|S2|G|928
9S3D|1|S2|G|929
9S3D|1|S2|C|930
9S3D|1|S2|C|931
*
9S3D|1|S2|G|1010
9S3D|1|S2|A|1011
9S3D|1|S2|A|1012
9S3D|1|S2|U|1013
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SB
- 40S ribosomal protein S3a
- Chain SN
- 40S ribosomal protein S13
- Chain Sb
- 40S ribosomal protein S27
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