3D structure

PDB id
9S7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
9S7B|1|A|C|2393, 9S7B|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7B|1|A|A|2384
9S7B|1|A|U|2385
9S7B|1|A|C|2386
9S7B|1|A|U|2387
9S7B|1|A|A|2388
9S7B|1|A|C|2389
9S7B|1|A|A|2390
9S7B|1|A|A|2391
9S7B|1|A|U|2392
9S7B|1|A|C|2393
9S7B|1|A|A|2394
9S7B|1|A|A|2395
9S7B|1|A|C|2396
9S7B|1|A|C|2397
9S7B|1|A|A|2398
9S7B|1|A|A|2399
9S7B|1|A|C|2400
*
9S7B|1|A|G|2403
9S7B|1|A|U|2404
9S7B|1|A|C|2405
9S7B|1|A|A|2406
9S7B|1|A|U|2407
9S7B|1|A|U|2408

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
Large ribosomal subunit protein mL37
Chain D
Large ribosomal subunit protein uL2m
Chain s
Large ribosomal subunit protein mL65

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.102 s