3D structure

PDB id
9S7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
CAUAAUCACUUG*CCUG
Length
16 nucleotides
Bulged bases
9S7B|1|A|A|2601, 9S7B|1|A|U|2607, 9S7B|1|A|U|2626
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7B|1|A|C|2597
9S7B|1|A|A|2598
9S7B|1|A|U|2599
9S7B|1|A|A|2600
9S7B|1|A|A|2601
9S7B|1|A|U|2602
9S7B|1|A|C|2603
9S7B|1|A|A|2604
9S7B|1|A|C|2605
9S7B|1|A|U|2606
9S7B|1|A|U|2607
9S7B|1|A|G|2608
*
9S7B|1|A|C|2624
9S7B|1|A|C|2625
9S7B|1|A|U|2626
9S7B|1|A|G|2627

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain A3
Small ribosomal subunit protein bS22, mitochondrial
Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain Aw
Transfer RNA; tRNA

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.198 s