3D structure

PDB id
9S7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UGGUCAAUUU*AUUA
Length
14 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7B|1|AA|U|229
9S7B|1|AA|G|230
9S7B|1|AA|G|231
9S7B|1|AA|U|232
9S7B|1|AA|C|233
9S7B|1|AA|A|234
9S7B|1|AA|A|235
9S7B|1|AA|U|236
9S7B|1|AA|U|237
9S7B|1|AA|U|238
*
9S7B|1|AA|A|263
9S7B|1|AA|U|264
9S7B|1|AA|U|265
9S7B|1|AA|A|266

Current chains

Chain AA
Large ribosomal subunit protein mL32

Nearby chains

Chain AD
Small ribosomal subunit protein uS5m
Chain AJ
Small ribosomal subunit protein uS12m
Chain AO
Small ribosomal subunit protein mS40
Chain AZ
Small ribosomal subunit protein mS33
Chain Az
mRNA (Visualization example)

Coloring options:

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