IL_9S7B_078

3D structure

PDB id

9S7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7B_078 not in the Motif Atlas

Geometric match to IL_4LFB_010

Geometric discrepancy: 0.1239

The information below is about IL_4LFB_010

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9S7B|1|AA|A|335
9S7B|1|AA|C|336
9S7B|1|AA|C|337
*
9S7B|1|AA|G|357
9S7B|1|AA|U|358
9S7B|1|AA|U|359

Current chains

Chain AA

Large ribosomal subunit protein mL32

Nearby chains

Chain AE

Small ribosomal subunit protein bS6m

Chain AI

Small ribosomal subunit protein uS11m

Chain AQ

Small ribosomal subunit protein bS21m