3D structure

PDB id
9S7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
AUAUC*GCCCU
Length
10 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7B|1|AA|A|539
9S7B|1|AA|U|540
9S7B|1|AA|A|541
9S7B|1|AA|U|542
9S7B|1|AA|C|543
*
9S7B|1|AA|G|817
9S7B|1|AA|C|818
9S7B|1|AA|C|819
9S7B|1|AA|C|820
9S7B|1|AA|U|821

Current chains

Chain AA
Large ribosomal subunit protein mL32

Nearby chains

Chain A2
Small ribosomal subunit protein mS37
Chain AF
Small ribosomal subunit protein uS7m
Chain AG
Small ribosomal subunit protein uS9m
Chain Ax
Transfer RNA; tRNA
Chain Az
mRNA (Visualization example)

Coloring options:

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