IL_9S7C_019

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

9S7C|1|A|A|2198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_019 not in the Motif Atlas

Homologous match to IL_6PRV_002

Geometric discrepancy: 0.2303

The information below is about IL_6PRV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9S7C|1|A|G|2197
9S7C|1|A|A|2198
9S7C|1|A|A|2199
9S7C|1|A|A|2200
*
9S7C|1|A|U|2211
9S7C|1|A|C|2212

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36m

Chain J

Large ribosomal subunit protein uL11m

Chain k

Large ribosomal subunit protein mL53

Chain l

Large ribosomal subunit protein mL54