IL_9S7C_033

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UG*UUAA

Length

6 nucleotides

Bulged bases

9S7C|1|A|U|2563, 9S7C|1|A|A|2564

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_033 not in the Motif Atlas

Homologous match to IL_8B0X_134

Geometric discrepancy: 0.1626

The information below is about IL_8B0X_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71421.5

Basepair signature

cWW-cWW

Number of instances in this motif group

36

Unit IDs

9S7C|1|A|U|2552
9S7C|1|A|G|2553
*
9S7C|1|A|U|2562
9S7C|1|A|U|2563
9S7C|1|A|A|2564
9S7C|1|A|A|2565

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL2m