IL_9S7C_048

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCU*AACA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7C_048 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.3848

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49140.2

Basepair signature

cWW-cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

9S7C|1|A|U|2953
9S7C|1|A|C|2954
9S7C|1|A|U|2955
*
9S7C|1|A|A|2968
9S7C|1|A|A|2969
9S7C|1|A|C|2970
9S7C|1|A|A|2971

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36m

Chain Aw

Transfer RNA; tRNA

Chain N

Large ribosomal subunit protein uL16m