IL_9S7C_083
3D structure
- PDB id
- 9S7C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S7C_083 not in the Motif Atlas
- Geometric match to IL_8CRE_425
- Geometric discrepancy: 0.0937
- The information below is about IL_8CRE_425
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
9S7C|1|AA|A|462
9S7C|1|AA|A|463
9S7C|1|AA|C|464
*
9S7C|1|AA|G|483
9S7C|1|AA|C|484
9S7C|1|AA|U|485
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Small ribosomal subunit protein mS37
- Chain AD
- Small ribosomal subunit protein uS5m
- Chain AJ
- Small ribosomal subunit protein uS12m
- Chain AN
- Small ribosomal subunit protein uS17m
- Chain AT
- Small ribosomal subunit protein mS25
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