3D structure

PDB id
9S7C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CUUGCUCAG*CCCAUG
Length
15 nucleotides
Bulged bases
9S7C|1|AA|U|599, 9S7C|1|AA|C|603, 9S7C|1|AA|C|695, 9S7C|1|AA|U|697
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7C|1|AA|C|597
9S7C|1|AA|U|598
9S7C|1|AA|U|599
9S7C|1|AA|G|600
9S7C|1|AA|C|601
9S7C|1|AA|U|602
9S7C|1|AA|C|603
9S7C|1|AA|A|604
9S7C|1|AA|G|605
*
9S7C|1|AA|C|693
9S7C|1|AA|C|694
9S7C|1|AA|C|695
9S7C|1|AA|A|696
9S7C|1|AA|U|697
9S7C|1|AA|G|698

Current chains

Chain AA
12S mitochondrial rRNA

Nearby chains

Chain AD
Small ribosomal subunit protein uS5m
Chain AK
Small ribosomal subunit protein uS14m
Chain AZ
Small ribosomal subunit protein mS33

Coloring options:

Copyright 2026 BGSU RNA group. Database contents are licensed under Creative Commons Attribution 4.0 International (CC BY 4.0). Page generated in 0.1712 s