3D structure

PDB id
9S7C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CACCC*GACAAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7C|1|AA|C|844
9S7C|1|AA|A|845
9S7C|1|AA|C|846
9S7C|1|AA|C|847
9S7C|1|AA|C|848
*
9S7C|1|AA|G|907
9S7C|1|AA|A|908
9S7C|1|AA|C|909
9S7C|1|AA|A|910
9S7C|1|AA|A|911
9S7C|1|AA|G|912

Current chains

Chain AA
12S mitochondrial rRNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain A3
Small ribosomal subunit protein bS22, mitochondrial
Chain AJ
Small ribosomal subunit protein uS12m
Chain Aw
Transfer RNA; tRNA
Chain Az
mRNA (Visualization example)

Coloring options:

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