3D structure

PDB id
9S7D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GCAAAUCUUA*UUCAGC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7D|1|A|G|2478
9S7D|1|A|C|2479
9S7D|1|A|A|2480
9S7D|1|A|A|2481
9S7D|1|A|A|2482
9S7D|1|A|U|2483
9S7D|1|A|C|2484
9S7D|1|A|U|2485
9S7D|1|A|U|2486
9S7D|1|A|A|2487
*
9S7D|1|A|U|2648
9S7D|1|A|U|2649
9S7D|1|A|C|2650
9S7D|1|A|A|2651
9S7D|1|A|G|2652
9S7D|1|A|C|2653

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain E
Large ribosomal subunit protein uL3m
Chain L
Large ribosomal subunit protein uL14m
Chain Q
Large ribosomal subunit protein bL19m

Coloring options:

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