IL_9S7D_074
3D structure
- PDB id
- 9S7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 9S7D|1|AA|A|291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9S7D_074 not in the Motif Atlas
- Homologous match to IL_8B0X_025
- Geometric discrepancy: 0.1242
- The information below is about IL_8B0X_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20847.3
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 6
Unit IDs
9S7D|1|AA|C|288
9S7D|1|AA|G|289
9S7D|1|AA|U|290
9S7D|1|AA|A|291
9S7D|1|AA|A|292
9S7D|1|AA|A|293
9S7D|1|AA|G|294
*
9S7D|1|AA|C|486
9S7D|1|AA|G|487
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Small ribosomal subunit protein mS37
- Chain A3
- Small ribosomal subunit protein bS22, mitochondrial
- Chain AD
- Small ribosomal subunit protein uS5m
- Chain AE
- Small ribosomal subunit protein bS6m
- Chain AJ
- Small ribosomal subunit protein uS12m
- Chain AN
- Small ribosomal subunit protein uS17m
- Chain AT
- Small ribosomal subunit protein mS25
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