IL_9S7E_026

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AAA*UCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9S7E_026 not in the Motif Atlas

Homologous match to IL_8B0X_124

Geometric discrepancy: 0.1046

The information below is about IL_8B0X_124

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_10432.3

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

11

Unit IDs

9S7E|1|A|A|2467
9S7E|1|A|A|2468
9S7E|1|A|A|2469
*
9S7E|1|A|U|2658
9S7E|1|A|C|2659
9S7E|1|A|U|2660

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3m

Chain L

Large ribosomal subunit protein uL14m

Chain Q

Large ribosomal subunit protein bL19m