IL_9SLG_044

3D structure

PDB id

9SLG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Doxycycline Bound E. coli Ribosome with Rearranged Peptidyl Transferase Centre

Experimental method

ELECTRON MICROSCOPY

Resolution

2.16 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

9SLG|1|A|U|1030, 9SLG|1|A|C|1031

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SLG|1|A|G|1003
9SLG|1|A|A|1004
9SLG|1|A|A|1005
9SLG|1|A|G|1006
*
9SLG|1|A|U|1023
9SLG|1|A|G|1024
9SLG|1|A|U|1025
9SLG|1|A|G|1026
9SLG|1|A|C|1027
9SLG|1|A|C|1028
9SLG|1|A|U|1029
9SLG|1|A|U|1030
9SLG|1|A|C|1031
9SLG|1|A|G|1032
9SLG|1|A|G|1033
9SLG|1|A|G|1034
9SLG|1|A|A|1035
9SLG|1|A|A|1036
9SLG|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14