IL_9SRA_091

3D structure

PDB id

9SRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAG*CGUCCAUGAGACAC

Length

18 nucleotides

Bulged bases

9SRA|1|1|C|2404, 9SRA|1|1|C|2412

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRA|1|1|G|2364
9SRA|1|1|G|2365
9SRA|1|1|A|2366
9SRA|1|1|G|2367
*
9SRA|1|1|C|2401
9SRA|1|1|G|2402
9SRA|1|1|U|2403
9SRA|1|1|C|2404
9SRA|1|1|C|2405
9SRA|1|1|A|2406
9SRA|1|1|U|2407
9SRA|1|1|G|2408
9SRA|1|1|A|2409
9SRA|1|1|G|2410
9SRA|1|1|A|2411
9SRA|1|1|C|2412
9SRA|1|1|A|2413
9SRA|1|1|C|2414

Current chains

Chain 1

rRNA 23S

Nearby chains