IL_9SRA_128
3D structure
- PDB id
- 9SRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GUGGCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 9SRA|1|2|U|497, 9SRA|1|2|A|498, 9SRA|1|2|U|500, 9SRA|1|2|A|501
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRA|1|2|G|481
9SRA|1|2|U|482
9SRA|1|2|G|483
9SRA|1|2|G|484
9SRA|1|2|C|485
9SRA|1|2|A|486
9SRA|1|2|G|487
*
9SRA|1|2|C|494
9SRA|1|2|G|495
9SRA|1|2|G|496
9SRA|1|2|U|497
9SRA|1|2|A|498
9SRA|1|2|A|499
9SRA|1|2|U|500
9SRA|1|2|A|501
9SRA|1|2|C|502
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain AN
- 30S ribosomal protein S12
- Chain AZ
- 30S ribosomal protein S3
- Chain H
- Dehydrogenase
Coloring options: