IL_9SRA_140

3D structure

PDB id

9SRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRA|1|2|C|746
9SRA|1|2|G|747
9SRA|1|2|A|748
9SRA|1|2|A|749
9SRA|1|2|C|750
*
9SRA|1|2|G|766
9SRA|1|2|G|767
9SRA|1|2|U|768
9SRA|1|2|A|769
9SRA|1|2|G|770

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain AM

30S ribosomal protein S11

Chain BB

Large ribosomal subunit protein uL2