IL_9SRA_153

3D structure

PDB id

9SRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUUG*CACUC

Length

9 nucleotides

Bulged bases

9SRA|1|2|U|1091

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRA|1|2|G|1089
9SRA|1|2|U|1090
9SRA|1|2|U|1091
9SRA|1|2|G|1092
*
9SRA|1|2|C|1119
9SRA|1|2|A|1120
9SRA|1|2|C|1121
9SRA|1|2|U|1122
9SRA|1|2|C|1123

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AK

30S ribosomal protein S9

Chain AL

30S ribosomal protein S10