IL_9SRB_070
3D structure
- PDB id
- 9SRB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUAAG*CGAAUG
- Length
- 11 nucleotides
- Bulged bases
- 9SRB|1|1|U|1796
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9SRB_070 not in the Motif Atlas
- Homologous match to IL_4V9F_056
- Geometric discrepancy: 0.4889
- The information below is about IL_4V9F_056
- Detailed Annotation
- tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_62654.1
- Basepair signature
- cWW-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
9SRB|1|1|C|1740
9SRB|1|1|U|1741
9SRB|1|1|A|1742
9SRB|1|1|A|1743
9SRB|1|1|G|1744
*
9SRB|1|1|C|1792
9SRB|1|1|G|1793
9SRB|1|1|A|1794
9SRB|1|1|A|1795
9SRB|1|1|U|1796
9SRB|1|1|G|1797
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BQ
- Large ribosomal subunit protein eL19
- Chain Bd
- Large ribosomal subunit protein eL34
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