IL_9SRB_138

3D structure

PDB id

9SRB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GGGAGAG*UGGAAC

Length

13 nucleotides

Bulged bases

9SRB|1|2|A|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRB|1|2|G|627
9SRB|1|2|G|628
9SRB|1|2|G|629
9SRB|1|2|A|630
9SRB|1|2|G|631
9SRB|1|2|A|632
9SRB|1|2|G|633
*
9SRB|1|2|U|707
9SRB|1|2|G|708
9SRB|1|2|G|709
9SRB|1|2|A|710
9SRB|1|2|A|711
9SRB|1|2|C|712

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AA

30S ribosomal protein S3Ae

Chain AQ

30S ribosomal protein S15

Chain AW

30S ribosomal protein S27e