IL_9SRB_143

3D structure

PDB id

9SRB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GGAGUACG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRB|1|2|G|858
9SRB|1|2|G|859
9SRB|1|2|A|860
9SRB|1|2|G|861
9SRB|1|2|U|862
9SRB|1|2|A|863
9SRB|1|2|C|864
9SRB|1|2|G|865
*
9SRB|1|2|U|876
9SRB|1|2|G|877
9SRB|1|2|A|878
9SRB|1|2|A|879
9SRB|1|2|A|880
9SRB|1|2|C|881

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain A0

Small ribosomal subunit protein eS32

Chain AN

30S ribosomal protein S12