IL_9SRC_079
3D structure
- PDB id
- 9SRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- AGCUAG*UUUGUACU
- Length
- 14 nucleotides
- Bulged bases
- 9SRC|1|1|U|2057, 9SRC|1|1|U|2072, 9SRC|1|1|C|2076
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRC|1|1|A|2054
9SRC|1|1|G|2055
9SRC|1|1|C|2056
9SRC|1|1|U|2057
9SRC|1|1|A|2058
9SRC|1|1|G|2059
*
9SRC|1|1|U|2070
9SRC|1|1|U|2071
9SRC|1|1|U|2072
9SRC|1|1|G|2073
9SRC|1|1|U|2074
9SRC|1|1|A|2075
9SRC|1|1|C|2076
9SRC|1|1|U|2077
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BB
- Large ribosomal subunit protein uL2
- Chain Bi
- Large ribosomal subunit protein eL43
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