IL_9SRC_093

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GCGCAGCGUAG*CC

Length

13 nucleotides

Bulged bases

9SRC|1|1|C|2351, 9SRC|1|1|C|2356, 9SRC|1|1|G|2357, 9SRC|1|1|U|2358, 9SRC|1|1|A|2359

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|1|G|2350
9SRC|1|1|C|2351
9SRC|1|1|G|2352
9SRC|1|1|C|2353
9SRC|1|1|A|2354
9SRC|1|1|G|2355
9SRC|1|1|C|2356
9SRC|1|1|G|2357
9SRC|1|1|U|2358
9SRC|1|1|A|2359
9SRC|1|1|G|2360
*
9SRC|1|1|C|2418
9SRC|1|1|C|2419

Current chains

Chain 1

rRNA 23S

Nearby chains