IL_9SRC_094

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GGAG*CGUCCAUGAGACAC

Length

18 nucleotides

Bulged bases

9SRC|1|1|C|2404, 9SRC|1|1|C|2412

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|1|G|2364
9SRC|1|1|G|2365
9SRC|1|1|A|2366
9SRC|1|1|G|2367
*
9SRC|1|1|C|2401
9SRC|1|1|G|2402
9SRC|1|1|U|2403
9SRC|1|1|C|2404
9SRC|1|1|C|2405
9SRC|1|1|A|2406
9SRC|1|1|U|2407
9SRC|1|1|G|2408
9SRC|1|1|A|2409
9SRC|1|1|G|2410
9SRC|1|1|A|2411
9SRC|1|1|C|2412
9SRC|1|1|A|2413
9SRC|1|1|C|2414

Current chains

Chain 1

rRNA 23S

Nearby chains