IL_9SRC_133
3D structure
- PDB id
- 9SRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- (4AC)GUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4AC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRC|1|2|4AC|546
9SRC|1|2|G|547
9SRC|1|2|U|548
9SRC|1|2|A|549
9SRC|1|2|G|550
*
9SRC|1|2|U|724
9SRC|1|2|G|725
9SRC|1|2|A|726
9SRC|1|2|G|727
9SRC|1|2|G|728
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AI
- 30S ribosomal protein S8
- Chain AN
- 30S ribosomal protein S12
- Chain AQ
- 30S ribosomal protein S15
- Chain AR
- 30S ribosomal protein S17
Coloring options: