IL_9SRC_140

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GUAC*(OMG)GAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|G|641
9SRC|1|2|U|642
9SRC|1|2|A|643
9SRC|1|2|C|644
*
9SRC|1|2|OMG|680
9SRC|1|2|G|681
9SRC|1|2|A|682
9SRC|1|2|C|683

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AA

30S ribosomal protein S3Ae

Chain AM

30S ribosomal protein S11

Chain BB

Large ribosomal subunit protein uL2