IL_9SRC_144

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GGAGUACG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|G|858
9SRC|1|2|G|859
9SRC|1|2|A|860
9SRC|1|2|G|861
9SRC|1|2|U|862
9SRC|1|2|A|863
9SRC|1|2|C|864
9SRC|1|2|G|865
*
9SRC|1|2|U|876
9SRC|1|2|G|877
9SRC|1|2|A|878
9SRC|1|2|A|879
9SRC|1|2|A|880
9SRC|1|2|C|881

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain A0

Small ribosomal subunit protein eS32

Chain AN

30S ribosomal protein S12