IL_9SRC_150

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GGAUGAAG*CGGAC

Length

13 nucleotides

Bulged bases

9SRC|1|2|U|974

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|G|971
9SRC|1|2|G|972
9SRC|1|2|A|973
9SRC|1|2|U|974
9SRC|1|2|G|975
9SRC|1|2|A|976
9SRC|1|2|A|977
9SRC|1|2|G|978
*
9SRC|1|2|C|998
9SRC|1|2|G|999
9SRC|1|2|G|1000
9SRC|1|2|A|1001
9SRC|1|2|C|1002

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain A3

50S ribosomal protein L7Ae

Chain AP

30S ribosomal protein S14 type Z

Chain AY

30S ribosomal protein S27ae