IL_9SRC_162

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CGGAUC*GUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|C|1277
9SRC|1|2|G|1278
9SRC|1|2|G|1279
9SRC|1|2|A|1280
9SRC|1|2|U|1281
9SRC|1|2|C|1282
*
9SRC|1|2|G|1303
9SRC|1|2|U|1304
9SRC|1|2|G|1305
9SRC|1|2|A|1306
9SRC|1|2|A|1307
9SRC|1|2|G|1308

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AH

30S ribosomal protein S7

Chain AO

30S ribosomal protein S13

Chain AU

30S ribosomal protein S19e