IL_9SRD_091

3D structure

PDB id

9SRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GGAG*CGUCCAUGAGACAC

Length

18 nucleotides

Bulged bases

9SRD|1|1|C|2404, 9SRD|1|1|C|2412

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRD|1|1|G|2364
9SRD|1|1|G|2365
9SRD|1|1|A|2366
9SRD|1|1|G|2367
*
9SRD|1|1|C|2401
9SRD|1|1|G|2402
9SRD|1|1|U|2403
9SRD|1|1|C|2404
9SRD|1|1|C|2405
9SRD|1|1|A|2406
9SRD|1|1|U|2407
9SRD|1|1|G|2408
9SRD|1|1|A|2409
9SRD|1|1|G|2410
9SRD|1|1|A|2411
9SRD|1|1|C|2412
9SRD|1|1|A|2413
9SRD|1|1|C|2414

Current chains

Chain 1

rRNA 23S

Nearby chains