IL_9SRD_144

3D structure

PDB id

9SRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

ACUA*UCCCU

Length

9 nucleotides

Bulged bases

9SRD|1|2|C|905, 9SRD|1|2|U|906

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRD|1|2|A|904
9SRD|1|2|C|905
9SRD|1|2|U|906
9SRD|1|2|A|907
*
9SRD|1|2|U|1354
9SRD|1|2|C|1355
9SRD|1|2|C|1356
9SRD|1|2|C|1357
9SRD|1|2|U|1358

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AH

30S ribosomal protein S7

Chain AK

30S ribosomal protein S9

Chain AL

30S ribosomal protein S10

Chain AX

30S ribosomal protein S28e

Chain H

Dehydrogenase