IL_9SRE_078
3D structure
- PDB id
- 9SRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- AGCUAG*UUUGUACU
- Length
- 14 nucleotides
- Bulged bases
- 9SRE|1|1|U|2057, 9SRE|1|1|U|2072, 9SRE|1|1|C|2076
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRE|1|1|A|2054
9SRE|1|1|G|2055
9SRE|1|1|C|2056
9SRE|1|1|U|2057
9SRE|1|1|A|2058
9SRE|1|1|G|2059
*
9SRE|1|1|U|2070
9SRE|1|1|U|2071
9SRE|1|1|U|2072
9SRE|1|1|G|2073
9SRE|1|1|U|2074
9SRE|1|1|A|2075
9SRE|1|1|C|2076
9SRE|1|1|U|2077
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain BB
- Large ribosomal subunit protein uL2
- Chain Bi
- Large ribosomal subunit protein eL43
Coloring options: