IL_9SRE_091
3D structure
- PDB id
- 9SRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- GCGGGAG*CGUCCAUGAGACACCGC
- Length
- 24 nucleotides
- Bulged bases
- 9SRE|1|1|C|2404, 9SRE|1|1|C|2412
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRE|1|1|G|2361
9SRE|1|1|C|2362
9SRE|1|1|G|2363
9SRE|1|1|G|2364
9SRE|1|1|G|2365
9SRE|1|1|A|2366
9SRE|1|1|G|2367
*
9SRE|1|1|C|2401
9SRE|1|1|G|2402
9SRE|1|1|U|2403
9SRE|1|1|C|2404
9SRE|1|1|C|2405
9SRE|1|1|A|2406
9SRE|1|1|U|2407
9SRE|1|1|G|2408
9SRE|1|1|A|2409
9SRE|1|1|G|2410
9SRE|1|1|A|2411
9SRE|1|1|C|2412
9SRE|1|1|A|2413
9SRE|1|1|C|2414
9SRE|1|1|C|2415
9SRE|1|1|G|2416
9SRE|1|1|C|2417
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain 4
- Transfer RNA; tRNA
- Chain BA
- Large ribosomal subunit protein uL1
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