IL_9SRE_120
3D structure
- PDB id
- 9SRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.11 Å
Loop
- Sequence
- GAUUAG*(4AC)GAAGAUC
- Length
- 14 nucleotides
- Bulged bases
- 9SRE|1|2|U|253, 9SRE|1|2|A|289
- QA status
- Modified nucleotides: 4AC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9SRE|1|2|G|251
9SRE|1|2|A|252
9SRE|1|2|U|253
9SRE|1|2|U|254
9SRE|1|2|A|255
9SRE|1|2|G|256
*
9SRE|1|2|4AC|286
9SRE|1|2|G|287
9SRE|1|2|A|288
9SRE|1|2|A|289
9SRE|1|2|G|290
9SRE|1|2|A|291
9SRE|1|2|U|292
9SRE|1|2|C|293
Current chains
- Chain 2
- rRNA 16S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain A0
- Small ribosomal subunit protein eS32
- Chain AJ
- 30S ribosomal protein S8e
- Chain AN
- 30S ribosomal protein S12
- Chain AR
- 30S ribosomal protein S17
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