IL_9SRE_147

3D structure

PDB id

9SRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

GGAUGAAG*CGGAC

Length

13 nucleotides

Bulged bases

9SRE|1|2|U|974

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRE|1|2|G|971
9SRE|1|2|G|972
9SRE|1|2|A|973
9SRE|1|2|U|974
9SRE|1|2|G|975
9SRE|1|2|A|976
9SRE|1|2|A|977
9SRE|1|2|G|978
*
9SRE|1|2|C|998
9SRE|1|2|G|999
9SRE|1|2|G|1000
9SRE|1|2|A|1001
9SRE|1|2|C|1002

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain A3

50S ribosomal protein L7Ae

Chain AP

30S ribosomal protein S14 type Z

Chain AY

30S ribosomal protein S27ae